RetrogeneDB ID: | retro_tbel_3160 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_132284:6349..6623(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL22 | ||
Ensembl ID: | ENSTBEG00000009172 | ||
Aliases: | None | ||
Description: | ribosomal protein L22 [Source:HGNC Symbol;Acc:10315] |
Percent Identity: | 71.58 % |
Parental protein coverage: | 73.44 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | KKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLK |
KKQVLKF.L.CTHPV.DGIM.AA.....L..RIKVNGKAGNLG.GVVT.ERSKSKI..TSEVP..KRYLK | |
Retrocopy | KKQVLKFPLYCTHPV-DGIMGAAMLSISL--RIKVNGKAGNLGRGVVTTERSKSKINATSEVPSFKRYLK |
Parental | YLTKKYLK-KNNLRDWLRVVANSKE |
YLT.K....K.N.RDWL.V.ANS.E | |
Retrocopy | YLTHKKTL>KSNQRDWLHVAANSRE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |