RetrogeneDB ID: | retro_tbel_3090 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_129694:31597..31889(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL22 | ||
Ensembl ID: | ENSTBEG00000009172 | ||
Aliases: | None | ||
Description: | ribosomal protein L22 [Source:HGNC Symbol;Acc:10315] |
Percent Identity: | 60. % |
Parental protein coverage: | 76.56 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | PVEDGI-MDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNL |
PV.DG....AA..EQ.LQER...NGKAG.L.GG.V.I.RS.SK.TVTSEVP..KR.LK.LTK.YLKK.NL | |
Retrocopy | PVGDGV<RGAASREQSLQERMTANGKAGCLSGGPVAIGRSGSKTTVTSEVPLAKRCLKHLTKSYLKKQNL |
Parental | RDWLRVVANSKESYE-LRYFQINQDEEEEE |
.DW....ANSKE........Q..QDEEE.E | |
Retrocopy | CDWSHIAANSKENRK<VCHLQSHQDEEEAE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |