RetrogeneDB ID: | retro_ogar_917 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873530.1:35183017..35183400(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSOGAG00000031020 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL22 | ||
Ensembl ID: | ENSOGAG00000014776 | ||
Aliases: | None | ||
Description: | ribosomal protein L22 [Source:HGNC Symbol;Acc:10315] |
Percent Identity: | 89.92 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MAPVKKLVAKGGKK-KKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSK |
MAPVKKLVAK.GKK.KKQ.LKFTLD.THPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSK.K | |
Retrocopy | MAPVKKLVAKWGKK<KKQILKFTLDYTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKNK |
Parental | ITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYFQINQDEEEEEDED |
I.VTSEVPFSK.YLKYLTKKY.KKNNLRDWLRVVA.SKESYEL.YFQ..QDEEEEEDE. | |
Retrocopy | IMVTSEVPFSKSYLKYLTKKYVKKNNLRDWLRVVASSKESYELCYFQVDQDEEEEEDEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |