RetrogeneDB ID: | retro_tbel_4225 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_7244:90785..91166(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL22 | ||
Ensembl ID: | ENSTBEG00000009172 | ||
Aliases: | None | ||
Description: | ribosomal protein L22 [Source:HGNC Symbol;Acc:10315] |
Percent Identity: | 88.37 % |
Parental protein coverage: | 99.22 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MAPVKKLVAKGGKKK-KQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSK |
M.PVKKLV.KGG....KQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSK | |
Retrocopy | MFPVKKLVPKGGXXX>KQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSK |
Parental | ITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYFQINQD-EEEEEDE |
ITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRV.ANSKESYELRYFQI....E...ED. | |
Retrocopy | ITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVAANSKESYELRYFQI*DE<ERRDEDK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |