RetrogeneDB ID: | retro_tbel_1047 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3676:46615..46851(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL22 | ||
Ensembl ID: | ENSTBEG00000009172 | ||
Aliases: | None | ||
Description: | ribosomal protein L22 [Source:HGNC Symbol;Acc:10315] |
Percent Identity: | 67.06 % |
Parental protein coverage: | 63.28 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 4 |
Parental | PVEDG-IMDAANFEQFL-QERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYL-KYLTK-KYLKK |
PVED..I..AAN.EQFL.QE.IK..G...NLGGG..TI.RSKSKI..TSEVPFSKRYL..YLTK.K.LK. | |
Retrocopy | PVEDE<IINAANSEQFL<QEKIKMSGNTRNLGGGAGTIGRSKSKIPITSEVPFSKRYL<EYLTK<KHLKS |
Parental | NNLRDWLRVVANSKE |
N...DWL..VANS.E | |
Retrocopy | NSC-DWLHIVANSRE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |