RetrogeneDB ID: | retro_lafr_981 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_56:4811586..4811974(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL22 | ||
Ensembl ID: | ENSLAFG00000006352 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 68.94 % |
Parental protein coverage: | 99.22 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MAPVKKLVAKGGK-KKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSK |
..PVK.LV.KGGK.K..QVLKFTLDCTHPVEDGIMDAANFEQFLQER.KVNGKAGNL.GGVVTIERSKSK | |
Retrocopy | VGPVKRLVEKGGK<KQMQVLKFTLDCTHPVEDGIMDAANFEQFLQERVKVNGKAGNLSGGVVTIERSKSK |
Parental | ITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKE-SYELRY---FQINQDEEEEEDE |
ITVTS................LK.N.L.D.L.VVANSKE..YELR.....QI.QDEEEE... | |
Retrocopy | ITVTSQXXXXXXXXXXXXXXXLKNNHLCD*LCVVANSKE<NYELRFMYELQIHQDEEEEDED |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |