RetrogeneDB ID: | retro_tbel_3482 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_142256:68933..69266(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL22 | ||
Ensembl ID: | ENSTBEG00000009172 | ||
Aliases: | None | ||
Description: | ribosomal protein L22 [Source:HGNC Symbol;Acc:10315] |
Percent Identity: | 84.96 % |
Parental protein coverage: | 86.72 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | VLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSK-SKITVTSEVPFSKRYLKYL |
VLKF.LDCTH.VEDGIMDAANF..FLQERIKVN.KAGNL..GV.TIERSK.SKI.VTSEVPFSKRYLKYL | |
Retrocopy | VLKFILDCTHSVEDGIMDAANFD*FLQERIKVNEKAGNLSEGVITIERSK<SKIHVTSEVPFSKRYLKYL |
Parental | TKK-YLKKNNLRDWLRVVANSKESYELRYFQINQDEEEEEDED |
TKK.YLKKNNL.D.L..VANSKESYEL.YFQINQDEEEEEDE. | |
Retrocopy | TKK>YLKKNNLHD*LSIVANSKESYELHYFQINQDEEEEEDEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |