RetrogeneDB ID: | retro_tbel_582 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_2479:28027..28387(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL22 | ||
Ensembl ID: | ENSTBEG00000009172 | ||
Aliases: | None | ||
Description: | ribosomal protein L22 [Source:HGNC Symbol;Acc:10315] |
Percent Identity: | 77.87 % |
Parental protein coverage: | 91.41 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | KKLVAK--GGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITV |
KKLV.K........QVLKF.LDCTH.VEDGIMDAANFE.FLQERIKVNGKAGNLGG.VVT.ERSK.KIT. | |
Retrocopy | KKLVVKRXXXXXXEQVLKFPLDCTHAVEDGIMDAANFEEFLQERIKVNGKAGNLGGSVVTMERSKNKITI |
Parental | TSEVPF-SKRYLKYLTKKYLK-KN-NLRDWLRVVANSKESYELRYFQINQDE |
TS.VPF.S.RYLKYLTKKYLK.KN....DWLRVVANSKESY...YFQINQDE | |
Retrocopy | TSQVPF>SRRYLKYLTKKYLKKKN<SMWDWLRVVANSKESYK*CYFQINQDE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |