RetrogeneDB ID: | retro_itri_1581 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393554.1:1150470..1150898(+) | ||
Located in intron of: | ENSSTOG00000015632 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ACP1 | ||
Ensembl ID: | ENSSTOG00000002520 | ||
Aliases: | None | ||
Description: | acid phosphatase 1, soluble [Source:HGNC Symbol;Acc:122] |
Percent Identity: | 85.14 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 4 |
Parental | GNICRSPIAEAVFRKLVTDQNDLDNWRIDSAATSTYEV-GNP-PDYRG-QSCMRKHGIPMNHVARQVTKE |
GNIC..PIAEA.FRKLVTDQN.LDNWR.DSAATSTYEV.G.P.PDY.G.QS.MRKHGIPMN..ARQVTKE | |
Retrocopy | GNICQLPIAEAIFRKLVTDQNNLDNWRTDSAATSTYEV<GEP<PDYHG<QSYMRKHGIPMNDIARQVTKE |
Parental | DLATFDYILCMDESNLRDLNRKSNQVKNCKAKIELLGSYDPQKQLII-EDPYYGNDADFEVVYQQCLRCC |
DL.TFD..LCMDESNLRDLNRK.NQVKNCKAKIELLGSYDPQKQLI..ED.YYGNDAD.EVVYQQ.LRCC | |
Retrocopy | DLVTFD*TLCMDESNLRDLNRKNNQVKNCKAKIELLGSYDPQKQLIL<EDLYYGNDADSEVVYQQRLRCC |
Parental | KAFLEKAH |
KAFLEKAH | |
Retrocopy | KAFLEKAH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |