RetrogeneDB ID: | retro_dord_396 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | scaffold_16115:21864..22124(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | Rps27a | ||
Ensembl ID: | ENSDORG00000006291 | ||
Aliases: | None | ||
Description: | ribosomal protein S27A [Source:MGI Symbol;Acc:MGI:1925544] |
Percent Identity: | 79.78 % |
Parental protein coverage: | 81.31 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | DTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKS-YTTP |
DT..N.KAKIQDKEGI.P..Q.R..FAGKQLEDG.TLSDYNIQKE.T.HL.LRLRGGAKKRKK.S..TTP | |
Retrocopy | DTKHNIKAKIQDKEGI-PPDQ>RVTFAGKQLEDGCTLSDYNIQKEPTFHLELRLRGGAKKRKKQS>NTTP |
Parental | KKNKHKRKKVKLAVLKYYK |
K.NKHKRKKVKLAVLK.YK | |
Retrocopy | KRNKHKRKKVKLAVLKHYK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |