RetrogeneDB ID: | retro_tbel_1946 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_6055:642915..643233(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSTBEG00000004626 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 86.92 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV |
MQIFVKTLTGKT.TLEVE.SDTI.NVKAKIQDKEGIPPDQQRLIFAGKQLEDG.TLSDYNIQKESTLHL. | |
Retrocopy | MQIFVKTLTGKTVTLEVELSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGSTLSDYNIQKESTLHLM |
Parental | LRLRGGAKKRKKKSYTTPKKNKHKRKST-LVALTHYK |
LRL.GGAKKR.KKSYTTPKKNKHKRK...L..L..YK | |
Retrocopy | LRLCGGAKKR-KKSYTTPKKNKHKRKRVKLTVLRYYK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |