RetrogeneDB ID: | retro_tbel_3258 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_134963:42467..42701(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSTBEG00000004626 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 66.25 % |
Parental protein coverage: | 72.64 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | FVKTLTGKTITLEVEPSDTIEN-VKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDYNI-QKESTLHLV |
F.K.L.GK...LEVE..D.IEN..KA.I......P.DQQ.RLIF.GKQLE.GRTL.DYNI..KESTLHL. | |
Retrocopy | FGKILAGKDHHLEVEALDAIEN>IKATIRVRKRSPLDQQ>RLIFTGKQLEVGRTLPDYNI>PKESTLHLM |
Parental | LRLRGGAKKR |
LRLRGGA.KR | |
Retrocopy | LRLRGGAEKR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |