RetrogeneDB ID: | retro_tbel_1566 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_5089:30615..30931(+) | ||
Located in intron of: | ENSTBEG00000008261 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSTBEG00000004626 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 70.09 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV |
MQIFVKTL.GKTI.L.VEP..TI.NV.AKI..KEGIPPDQ.RLIFAGKQLED..TLSDY.IQKEST.HL. | |
Retrocopy | MQIFVKTLKGKTIALKVEPLNTIQNVRAKI*AKEGIPPDQLRLIFAGKQLEDRCTLSDYSIQKESTIHLM |
Parental | LRLRGGAKKRKKKSYTTPK-KNKHKRKSTLVALTHYK |
LRLRGGAKKRK.........K.K.K.K..LV.L..YK | |
Retrocopy | LRLRGGAKKRKVLYHSLEE>KHKRK-KVKLVVLKYYK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |