RetrogeneDB ID: | retro_tbel_4313 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_76401:1523..1751(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSTBEG00000004626 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 82.89 % |
Parental protein coverage: | 71.7 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV |
MQIF.KT..GKTITLEVEPSDT.EN.KAKIQDKEGIPPDQQR...AGKQL.DG.TLSDYN.QKESTLHL. | |
Retrocopy | MQIFMKTPAGKTITLEVEPSDTTENAKAKIQDKEGIPPDQQRPVSAGKQLGDGHTLSDYNNQKESTLHLA |
Parental | LRLRGG |
LR.RGG | |
Retrocopy | LR*RGG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |