RetrogeneDB ID: | retro_tbel_1623 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_5278:499409..499691(+) | ||
Located in intron of: | ENSTBEG00000007279 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSTBEG00000004626 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 67.01 % |
Parental protein coverage: | 89.62 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDYNIQKESTLHLV |
QIFVKTL.GKTITLEVEPS......KA.I.D.E.IP...QRLIFAGKQLEDG...L.D.NI.KESTLHLV | |
Retrocopy | QIFVKTLKGKTITLEVEPSVQQKM*KAEIYDQEEIPSGKQRLIFAGKQLEDG<NILPDCNIRKESTLHLV |
Parental | L-RLRGGAKKRKKKSYTTPKKNKHKRK |
L.RL.GG...RKK..Y..P...KHKRK | |
Retrocopy | L>RLGGGDRERKKTLY-HPSMIKHKRK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |