RetrogeneDB ID: | retro_tbel_2354 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_109448:94456..94680(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSTBEG00000004626 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 85.53 % |
Parental protein coverage: | 70.75 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY-NIQKESTLHL |
MQIF.KTL.GKT.TLEVEPSDTI.NVK.KIQDKEGIP.DQQ.LIFAGKQLEDGRTLS.Y..IQKES.LHL | |
Retrocopy | MQIFMKTLPGKTTTLEVEPSDTIKNVKTKIQDKEGIPRDQQHLIFAGKQLEDGRTLSNY<QIQKESMLHL |
Parental | VLRLRG |
VLRLRG | |
Retrocopy | VLRLRG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |