RetrogeneDB ID: | retro_tbel_3649 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_147848:9808..10093(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSTBEG00000004626 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 59.18 % |
Parental protein coverage: | 90.57 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL-SDYNIQKESTLHLVLRLRGGAKK |
K.ITL..E..D...N..AKIQDKE.I.PDQQRLIFAGK.LEDG..L.S..NI..ES.LHLVLRL.GGAKK | |
Retrocopy | KIITLMAELPDIVKNMTAKIQDKEEISPDQQRLIFAGKELEDGYIL>SHCNI*EESSLHLVLRLHGGAKK |
Parental | R-KKKSYTTPKKNKHKRKSTLVALTHYK |
R.K........K.K..R..TL..L..YK | |
Retrocopy | R<KPYTTPKKNKHK-TREVTLAILN*YK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |