RetrogeneDB ID: | retro_tbel_709 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_2813:19099..19342(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSTBEG00000004626 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 60.71 % |
Parental protein coverage: | 77.36 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | DTIENVKAKIQDKEGIPPDQQRLIFA-GKQLEDGR-TLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTP |
D...N..........IPPDQQRLI...G.Q.EDGR.T.SDY.IQK..TL.LVLRLRGG.KKR.KKSYTTP | |
Retrocopy | DFLKNPYREDYNPR*IPPDQQRLILL<GRQWEDGR>TVSDYSIQKAPTLPLVLRLRGGVKKR-KKSYTTP |
Parental | KKNKHKRKSTLVAL |
KKN..KRK....A. | |
Retrocopy | KKNNRKRKKVKLAV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |