RetrogeneDB ID: | retro_tbel_1403 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_4603:214021..214304(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSTBEG00000004626 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 70.71 % |
Parental protein coverage: | 91.51 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR-TLSDYNIQKESTLHLVLRLRGGA |
TGKTIT.E.EPS.TIENVK.KIQDKEGIPPDQQRLIFAGKQ...GR....DYNI.KE..LHLVLRLR.GA | |
Retrocopy | TGKTITFEAEPSNTIENVKLKIQDKEGIPPDQQRLIFAGKQV--GRWSYFDYNIRKEPMLHLVLRLRDGA |
Parental | KKRKKKSY-TTPKKNKHKRKSTLVALTHY |
KK.K..SY.T..K.NKHKRK....A...Y | |
Retrocopy | KK-KEVSY>TSKK-NKHKRKKVKLAVLKY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |