RetrogeneDB ID: | retro_tbel_3505 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_143022:3175..3384(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSTBEG00000004626 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 78.08 % |
Parental protein coverage: | 66.04 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | KTITLEVEPSDTIENVKAK-IQDKEGIPPDQQRLI-FAGKQLEDGRTLSDYNIQ-KESTLHLVLRLRGGA |
KTITL..EPSDTIENVKAK.IQDKE.IPPD.QRLI.FA.KQ.....TLSDYNIQ.KESTLHLVL.LRG.A | |
Retrocopy | KTITLKLEPSDTIENVKAK<IQDKERIPPDEQRLI>FAVKQFGRWHTLSDYNIQ<KESTLHLVLILRGAA |
Parental | KKR |
.KR | |
Retrocopy | EKR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |