RetrogeneDB ID: | retro_tbel_4565 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_90433:1298..1594(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSTBEG00000004626 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 76.24 % |
Parental protein coverage: | 94.34 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG-KQLEDGRTLSDYNIQKESTLHLVLRLR |
K...GKTITLEV..SD.IE.VKA.I.DKEGIPPDQQRLIF...KQLED..TLSDYNIQKE.TLHLVLRLR | |
Retrocopy | KPFKGKTITLEVLLSDAIEDVKARI*DKEGIPPDQQRLIFVS<KQLEDRHTLSDYNIQKEFTLHLVLRLR |
Parental | GGAKKRKKKSYTTPKKNKHKRKSTLVALTHY |
G.AKKR.KKSYTTPKKNKHKRK....A...Y | |
Retrocopy | GRAKKR-KKSYTTPKKNKHKRKEVKLAVLKY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |