RetrogeneDB ID: | retro_tbel_2739 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_117857:5..264(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSTBEG00000004626 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 79.78 % |
Parental protein coverage: | 83.02 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | PSDTIENVK-AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTT |
PSDT.ENVK.AK.QDKEGIPPDQQRLIFAGKQLE.GRTLSDYN.QKES.LHLVLRL.G..KKR.KKSYTT | |
Retrocopy | PSDTVENVK>AKMQDKEGIPPDQQRLIFAGKQLEGGRTLSDYNNQKESMLHLVLRLHGSVKKR-KKSYTT |
Parental | PKKNKHKRKSTLVALTHYK |
PKKNK.K.K..L..L..YK | |
Retrocopy | PKKNKQK-KVKLIVLKYYK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |