RetrogeneDB ID: | retro_tbel_3595 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_145612:612..928(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSTBEG00000004626 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 77.98 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MQIFVKTLTGKTIT-LEVEPSDTIENVKAKI-QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH |
MQIF.K.LTGKTIT.L.VEP.DTIENVKAKI.QDK.GI.PDQ.RLIFAGKQLEDG.TLSDY.I...S.LH | |
Retrocopy | MQIFIKSLTGKTIT<LKVEPWDTIENVKAKI<QDKKGISPDQRRLIFAGKQLEDGCTLSDYHI*QYSMLH |
Parental | LVLRLRGGAKKRKKKSYTTPKKNKHKRKST-LVALTHYK |
LVLRLRGGAKKRKK.SY.TPKKNKHKRK...L..L..YK | |
Retrocopy | LVLRLRGGAKKRKK-SYATPKKNKHKRKKVKLAVLIYYK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |