RetrogeneDB ID: | retro_tbel_396 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_1940:84737..84998(-) | ||
Located in intron of: | ENSTBEG00000006076 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSTBEG00000004626 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 85.39 % |
Parental protein coverage: | 83.96 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGA |
LTGKTITLE.E..DTIE.VKAKIQDKEGIPPD.QRLIFA.KQLEDG.TLSDYNIQKES.LHL.LRL.GGA | |
Retrocopy | LTGKTITLE-ELLDTIEYVKAKIQDKEGIPPD*QRLIFADKQLEDGCTLSDYNIQKESMLHLILRLCGGA |
Parental | KKRKKKSYTTPKKNKHKRK |
KK..KKSYTTP.KNKHKRK | |
Retrocopy | KK-IKKSYTTPRKNKHKRK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |