RetrogeneDB ID: | retro_tbel_1022 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3606:9122..9367(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSTBEG00000004626 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 70.59 % |
Parental protein coverage: | 77.36 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | MQIFVKTLTGKTITL-EVEPSDTIENVKAKIQDKEGIPPDQQRL-IFAGKQLEDGRTLS-DYNIQKESTL |
.QIF.K.L.GKTI.L..VE..DT.ENVKAK.Q.KEGIPPD..RL..FA.KQLED..TL..DYNIQKESTL | |
Retrocopy | IQIFIKSLMGKTIIL<QVELLDTTENVKAKTQPKEGIPPDHERL>LFADKQLEDVHTLL<DYNIQKESTL |
Parental | HLVLRLRGGAKKRKK |
HLVLRL.G..KK.KK | |
Retrocopy | HLVLRLHGDVKKIKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |