RetrogeneDB ID: | retro_tbel_703 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_28:66798..67037(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSTBEG00000004626 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 69.88 % |
Parental protein coverage: | 77.36 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MQIFVKTLTGKTITLEVEPSDTIENVKAKI-QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL |
MQI..K.L.GKTI.L.VEPSD..ENVK.KI.Q.KEGIPPDQQ..IF.GKQLEDG.TLSDY.IQKES...L | |
Retrocopy | MQISLKALMGKTIALKVEPSDKTENVKTKI<QGKEGIPPDQQKQIFVGKQLEDGHTLSDYKIQKESMFQL |
Parental | VLRLRGGAKKRKK |
...L.G..KKRKK | |
Retrocopy | M--LSGDTKKRKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |