RetrogeneDB ID: | retro_tbel_4021 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_5445:58456..58768(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSTBEG00000004626 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 83.81 % |
Parental protein coverage: | 99.06 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV |
MQIF.KTLTGKTITLEVEP..TIENVKAKI.DKEGIPPDQQRLIFA.KQLEDGRTLSDYNIQKESTLHLV | |
Retrocopy | MQIFIKTLTGKTITLEVEP*NTIENVKAKIKDKEGIPPDQQRLIFAAKQLEDGRTLSDYNIQKESTLHLV |
Parental | LRLRGGAKKRKKKSYTTPKKNKHKRKSTLVALTHY |
LRL.GGAKKR.KK.YTTP.KNKHK.K....A...Y | |
Retrocopy | LRLPGGAKKR-KKYYTTPRKNKHKKKKVNLAVLKY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |