RetrogeneDB ID: | retro_tbel_2122 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_101056:3806..3997(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSTBEG00000004626 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 81.54 % |
Parental protein coverage: | 60.38 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MQIFVKTL-TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE |
MQIF.KT..T.KTITLEVEPSD.IENVKAKIQDKEGI.PDQQR.IFAGKQL.D..TL.D.NIQKE | |
Retrocopy | MQIFLKTR<TSKTITLEVEPSDIIENVKAKIQDKEGILPDQQRRIFAGKQLKDDQTLFDCNIQKE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |