RetrogeneDB ID: | retro_tbel_874 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3202:214580..214888(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSTBEG00000004626 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 78.3 % |
Parental protein coverage: | 99.06 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES-TLHL |
MQIFVKTL..KTITLE..PSDTIENVKAKIQDKEGI.PDQQR.IFAGKQL.DG.TLS.Y.IQKES.TLHL | |
Retrocopy | MQIFVKTLMRKTITLE-KPSDTIENVKAKIQDKEGILPDQQRSIFAGKQLKDGHTLSAYDIQKES<TLHL |
Parental | VLRLRGGAKKRKKKSYTTPKKNKHKRKSTLVALTHY |
VLRL.GGAK.R.K.SYTTPKKNKHK.K....A...Y | |
Retrocopy | VLRLHGGAKTR-KNSYTTPKKNKHKGKKVKLAVLKY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |