RetrogeneDB ID: | retro_tbel_3665 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_148096:125046..125344(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSTBEG00000004626 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 87. % |
Parental protein coverage: | 93.4 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV |
MQIFVKTLTGKTITL.VE.SDTIENVKAKIQDKEGI.PDQQRLIFAGKQLEDG.TLSDYNIQKESTLHLV | |
Retrocopy | MQIFVKTLTGKTITLGVELSDTIENVKAKIQDKEGILPDQQRLIFAGKQLEDGHTLSDYNIQKESTLHLV |
Parental | LRLRGGA-KKRKKKSYTTPKKNKHKRKSTL |
LR.RGGA.K...KKSYTTPKKNK..R.S.L | |
Retrocopy | LRFRGGA>KXXXKKSYTTPKKNKRTRLSWL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |