RetrogeneDB ID: | retro_tbel_1606 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_5207:119559..119843(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSTBEG00000004626 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 74.49 % |
Parental protein coverage: | 91.51 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT-LSDYNIQKESTLHLVL |
I..KTLTGKTITLEVE..D.I.N.KAKI...EGIPPD.QRLIFAGKQLEDG.T..SDYNI.KES.LH.VL | |
Retrocopy | ICIKTLTGKTITLEVELLDRIGNKKAKIS-MEGIPPDEQRLIFAGKQLEDGHT<FSDYNI*KESMLHFVL |
Parental | RLRGGAKKRKKKSYTTPKKNKHKRKSTL |
RL.GG..KR.KKSYTTPKK.K.KRK..L | |
Retrocopy | RLCGGVEKR-KKSYTTPKKSKCKRKKRL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |