RetrogeneDB ID: | retro_tbel_1086 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3798:17802..18116(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSTBEG00000004626 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 77.57 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV |
MQIF.K.LTGKT.TLEVE.SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES.LHLV | |
Retrocopy | MQIFIKILTGKTVTLEVERSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESGLHLV |
Parental | LRLRGGAKKR-KKKSYTTPKKNKHKRKSTLVALTHYK |
LRLRGGAKKR.K........K.K.K.K..L..L..Y. | |
Retrocopy | LRLRGGAKKR<KSYTTPKKNKHKRK-KVKLAVLKYYE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |