RetrogeneDB ID: | retro_tbel_4547 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_89832:3919..4223(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSTBEG00000004626 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 67.62 % |
Parental protein coverage: | 98.11 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-LHL |
M.IF.K..TGK...LEV.PS.T.E..KAKIQD.E.IPPD.QRLIFAGKQLED..TLSDYNIQ.EST.L.. | |
Retrocopy | MHIFEKICTGKI--LEVKPSGTTETSKAKIQDIEEIPPDRQRLIFAGKQLEDRHTLSDYNIQVEST>LLP |
Parental | VLRLRGGAKKRKKKSYTTPKKNKHKRKSTLVALTH |
.LRL..G..KR.KKS.TTPKKNKHKRK..L..L.. | |
Retrocopy | LLRLCAGVMKR-KKS*TTPKKNKHKRKVKLAVLKY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |