RetrogeneDB ID: | retro_tbel_1081 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3784:134728..135032(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSTBEG00000004626 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 76.19 % |
Parental protein coverage: | 97.17 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | IFVKTLTGKTITLEV-EPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL |
IF.KTL.GKTI...V.EPSD.IENVKAKI....G.PPDQQRLIFAGKQLEDG.TLSDYNIQKESTL.LVL | |
Retrocopy | IFIKTLIGKTIASRV<EPSDKIENVKAKIEYMYGVPPDQQRLIFAGKQLEDGHTLSDYNIQKESTLCLVL |
Parental | RL-RGGAKKRKKKSYTTPKKNKHKRKSTLVALTHY |
RL..GGAKKR..KSYTTPKKNKHKRK....A...Y | |
Retrocopy | RL<SGGAKKR-RKSYTTPKKNKHKRKKVTPAVPKY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |