RetrogeneDB ID: | retro_tbel_4305 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_76099:3214..3495(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS27A | ||
Ensembl ID: | ENSTBEG00000004626 | ||
Aliases: | None | ||
Description: | ribosomal protein S27a [Source:HGNC Symbol;Acc:10417] |
Percent Identity: | 85.42 % |
Parental protein coverage: | 89.62 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | QIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV |
QIFVKTL.G.KTITL..EPSDT.ENVKA.IQDKEGI.PDQQRLIFAGKQLE.G..LSDYNIQKES.LHLV | |
Retrocopy | QIFVKTLKG<KTITLQAEPSDTVENVKARIQDKEGILPDQQRLIFAGKQLEHGLSLSDYNIQKESGLHLV |
Parental | LRLRGGAKKRKKKSYTTPKKNKHKRK |
LRL.GGAKK.KKKSYT.PKKNKHKRK | |
Retrocopy | LRLGGGAKK-KKKSYTIPKKNKHKRK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |