RetrogeneDB ID: | retro_mputfur_250 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896899.1:34662170..34662946(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | Nsa2 | ||
Ensembl ID: | ENSMPUG00000005795 | ||
Aliases: | None | ||
Description: | NSA2 ribosome biogenesis homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1913883] |
Percent Identity: | 95. % |
Parental protein coverage: | 99.62 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | PQNEYIELHRKRYGYRLDYHEKKRKKEGREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKR |
PQNEYIELH.K.YGYRLDYHEKKRKKEGREAHE.SKKAKKM.GLKAKLYHKQ.HAEKIQMKKTIKMHEKR | |
Retrocopy | PQNEYIELHWKCYGYRLDYHEKKRKKEGREAHEPSKKAKKMTGLKAKLYHKQHHAEKIQMKKTIKMHEKR |
Parental | NTKQKNDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRTGKR |
NTKQKNDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRT.KR | |
Retrocopy | NTKQKNDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRTRKR |
Parental | KKKAWKRMVTKVCFVGDGFTRKPPKYERFIRPMGLRFK-KAHVTHPELKATFCLPILGVKKNPSSPLYTT |
KKKAWKRMVTKVCFVGDGFT.KPPKYERFIRPMGLRFK.KAHVTHPELKATFCLP.LG....PSSPLYTT | |
Retrocopy | KKKAWKRMVTKVCFVGDGFT*KPPKYERFIRPMGLRFK<KAHVTHPELKATFCLPVLGXXXXPSSPLYTT |
Parental | LGVITKGTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV |
LGVITKGTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV | |
Retrocopy | LGVITKGTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |