RetrogeneDB ID: | retro_tbel_3724 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_149404:38364..38886(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NSA2 | ||
Ensembl ID: | ENSTBEG00000012978 | ||
Aliases: | None | ||
Description: | NSA2 ribosome biogenesis homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:30728] |
Percent Identity: | 91.38 % |
Parental protein coverage: | 66.41 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MPQNEYIELHRKRYGYRLDYHEKKRKKESREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEK |
MPQN.YIELHRK.YGYRLDYHEKKRKKES.EAHE.SKKAKKMIGLK.KLYHKQ.HAEKIQMKKTIKMHEK | |
Retrocopy | MPQNKYIELHRKHYGYRLDYHEKKRKKESWEAHEHSKKAKKMIGLKTKLYHKQCHAEKIQMKKTIKMHEK |
Parental | RNTKQKNDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRTGK |
RNTKQKNDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQK.KEKAGKW.V.LPKVR.QGETEVLKVIRTGK | |
Retrocopy | RNTKQKNDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKWKEKAGKWKVLLPKVRTQGETEVLKVIRTGK |
Parental | R-EKAWKRMVTKVCF-GD-FT-KPPKYERFIRPM |
R..KAWKRMVTKVCF.GD.FT.KPPKYERFIRPM | |
Retrocopy | RKKKAWKRMVTKVCFVGDGFTRKPPKYERFIRPM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |