RetrogeneDB ID: | retro_etel_613 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_102702:469..871(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NSA2 | ||
Ensembl ID: | ENSETEG00000004095 | ||
Aliases: | None | ||
Description: | NSA2 ribosome biogenesis homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:30728] |
Percent Identity: | 67.16 % |
Parental protein coverage: | 51.54 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | MPQNEHIELHRKRYGYRLDYHERKRKKESREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEK |
M.QNE..ELH...YG...DYHE.KRKK.S..AHE.SKKAKKMIGLK.KL.HKQ.H.EK.QMK..IK...K | |
Retrocopy | MSQNEYTELHLQCYGCCTDYHEKKRKKGS*MAHELSKKAKKMIGLKLKLDHKQQHGEKKQMKNLIKVFDK |
Parental | RNTKQKNDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLK |
RNT.Q.ND..TPQGAVPAYLL..EGQ....V.SNM.KQK.KEK.GK.EV.LPK..AQG.TEVL. | |
Retrocopy | RNTNQNNDVQTPQGAVPAYLLEIEGQAQVQVRSNMTKQK*KEKTGKCEVHLPKAGAQGKTEVLQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |