RetrogeneDB ID: | retro_tbel_1778 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_5707:34570..34978(-) | ||
Located in intron of: | ENSTBEG00000015323 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NSA2 | ||
Ensembl ID: | ENSTBEG00000012978 | ||
Aliases: | None | ||
Description: | NSA2 ribosome biogenesis homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:30728] |
Percent Identity: | 84.29 % |
Parental protein coverage: | 53.12 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 4 |
Parental | MPQNEYIELHRKRYG-YRLDYHEK-KRKKESREAHE-RSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKM |
MPQNEYIELH.K.YG.YRLDYHEK..R.KES.E..E..SKKAKK..GLKAKLYHKQ.HAEKIQMKKTIKM | |
Retrocopy | MPQNEYIELHHKCYG>YRLDYHEK<MRNKESWEYRE<MSKKAKKNDGLKAKLYHKQCHAEKIQMKKTIKM |
Parental | HEKRNTKQKNDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKA-GKWEVPLPKVRAQGETEVLKVI |
HEKRNTKQKNDEKTPQGAVP.YLLDREGQSRAKVL.NMIKQ..KEKA.GKWEVPL.KVR.QGETE.LKVI | |
Retrocopy | HEKRNTKQKNDEKTPQGAVPPYLLDREGQSRAKVLPNMIKQEWKEKA>GKWEVPLSKVRTQGETEALKVI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |