RetrogeneDB ID: | retro_sara_620 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_242344:4249..5029(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSARG00000009424 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 96.92 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MPQNEYIELHRKRYGYRLDYHEKKRKKEGREAHERSRKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEK |
MPQNEYIELHRKRYGYRLDYHEKKRKKEG.EAHERSRKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEK | |
Retrocopy | MPQNEYIELHRKRYGYRLDYHEKKRKKEGQEAHERSRKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEK |
Parental | RNTKQKNDEKTPQGAMPEYLLDRERQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRTGK |
RNTKQKNDEKTPQGAMPEYLLDRERQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEV.KVIRTGK | |
Retrocopy | RNTKQKNDEKTPQGAMPEYLLDRERQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVIKVIRTGK |
Parental | RKKKAWKRMVTKVCFVGDGFTRKPPKYERFIRPMGLRFKKAHVTHPDLKATFCLSILGVKKNPSSPLYTT |
RKKKAWKRMVTKVCFVGDGFTRKPPKYERFIRPMGL.FKKAHVTHPDL.ATFC.SI.GVKKNPSSPLYTT | |
Retrocopy | RKKKAWKRMVTKVCFVGDGFTRKPPKYERFIRPMGLLFKKAHVTHPDL*ATFCSSIIGVKKNPSSPLYTT |
Parental | LGVITKGTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV |
LGVIT.GTVIEVNVSELGLVTQGGKVIWG.YAQVTNNPENDGCINAVLLV | |
Retrocopy | LGVITTGTVIEVNVSELGLVTQGGKVIWGIYAQVTNNPENDGCINAVLLV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |