RetrogeneDB ID: | retro_tbel_2102 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_994:94987..95491(-) | ||
Located in intron of: | ENSTBEG00000009434 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NSA2 | ||
Ensembl ID: | ENSTBEG00000012978 | ||
Aliases: | None | ||
Description: | NSA2 ribosome biogenesis homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:30728] |
Percent Identity: | 85.21 % |
Parental protein coverage: | 64.84 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MPQNEYIELHRKRYGYRLDYHEKKRKKESREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEK |
MPQNEY.ELHRK.YGYRLDYHE.KRKK.SREAH.RSKKAKKM.GLKAKLYH.QRHAEKIQMKKTIK.HEK | |
Retrocopy | MPQNEYTELHRKHYGYRLDYHEEKRKKASREAHKRSKKAKKMTGLKAKLYHEQRHAEKIQMKKTIKKHEK |
Parental | RNTKQKNDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRTGK |
RNTKQKNDEKT.QGAVPAYLLDREGQS.AKVLSNMIKQKRKEKAG.WEVPLPKVRAQGETEVLKVI.TGK | |
Retrocopy | RNTKQKNDEKTLQGAVPAYLLDREGQS*AKVLSNMIKQKRKEKAGRWEVPLPKVRAQGETEVLKVIQTGK |
Parental | REK-AWKRMVTKVCF-GD-FTKPPKYERF |
R.K.AW.RM...V.F.GD.FT..P..ERF | |
Retrocopy | RKKAAWERMIIEVFFVGDGFTRKP-LERF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |