RetrogeneDB ID: | retro_tbel_4270 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_74288:5022..5429(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NSA2 | ||
Ensembl ID: | ENSTBEG00000012978 | ||
Aliases: | None | ||
Description: | NSA2 ribosome biogenesis homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:30728] |
Percent Identity: | 85.51 % |
Parental protein coverage: | 53.52 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MPQNEYIELH-RKRYGYRLDYHEKKRKKESREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHE |
MPQNEY.ELH..K.YGYRLDYH.KKRKKES.EA.ER..K.K.MIGLKAKLYHKQ.HAEKIQM.KTIKMH. | |
Retrocopy | MPQNEYTELH<SKHYGYRLDYHAKKRKKESLEARERLMKVKRMIGLKAKLYHKQQHAEKIQMQKTIKMH- |
Parental | KRNTKQKNDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIR |
KRNTKQKNDEKTPQ.AVPAYLLDREGQS.A.VLSNMIKQKRKEKAGKWEVPL.KVR.QGETEVLK.IR | |
Retrocopy | KRNTKQKNDEKTPQRAVPAYLLDREGQS*ARVLSNMIKQKRKEKAGKWEVPLFKVRTQGETEVLKLIR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |