RetrogeneDB ID: | retro_etel_890 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_180327:1..457(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NSA2 | ||
Ensembl ID: | ENSETEG00000004095 | ||
Aliases: | None | ||
Description: | NSA2 ribosome biogenesis homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:30728] |
Percent Identity: | 81.58 % |
Parental protein coverage: | 58.46 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | VLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRTGKRKKKAWKRMVTKVCFVGDGFTRKPPKYERF |
.LSNMIKQ..KEKAG.WE.PLPK.RAQGETEVLK..RTGKRKKKAWKRM..KVCFVGDGFT..PPKYERF | |
Retrocopy | LLSNMIKQN*KEKAGTWEFPLPKARAQGETEVLKGLRTGKRKKKAWKRMAAKVCFVGDGFTWNPPKYERF |
Parental | IXXXGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVIWGK |
I...GL.FK.A.V.HPELKATFCLPILGVKKNPSSPLYTTLGVIT.GT....NVS.LGLVT.GGKVIWGK | |
Retrocopy | IRPMGLCFKEAPVRHPELKATFCLPILGVKKNPSSPLYTTLGVITIGTITDMNVSKLGLVT*GGKVIWGK |
Parental | YAQVTNNPENDG |
YA.VTNNPEN.G | |
Retrocopy | YAPVTNNPENNG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |