RetrogeneDB ID: | retro_tbel_2586 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_113546:7739..8157(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NSA2 | ||
Ensembl ID: | ENSTBEG00000012978 | ||
Aliases: | None | ||
Description: | NSA2 ribosome biogenesis homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:30728] |
Percent Identity: | 86.62 % |
Parental protein coverage: | 54.69 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | MPQNEYIELHRKRYGYRLDYHEKKRKKESREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEK |
MPQN.YIELH.K.YGY.LDYHEKKRKKES.EAHE.SKK.KK.IGLK.KLYHKQR.AEKIQMKKTIKMHEK | |
Retrocopy | MPQNKYIELHHKCYGYHLDYHEKKRKKESWEAHECSKKTKKIIGLKTKLYHKQRLAEKIQMKKTIKMHEK |
Parental | RNTKQKNDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKW-EVPLPKVRAQGETE-VLKVIRT |
RNTK.KNDEKTPQGAVPAYLLDREG.S.AKVLSNMIKQKRK.KA.KW.EVPLPKV.AQGETE.VLKVI.T | |
Retrocopy | RNTKLKNDEKTPQGAVPAYLLDREG*SQAKVLSNMIKQKRKKKAEKW<EVPLPKVLAQGETE<VLKVI*T |
Parental | GK |
GK | |
Retrocopy | GK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |