RetrogeneDB ID: | retro_tbel_91 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_1091:5824..6216(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NSA2 | ||
Ensembl ID: | ENSTBEG00000012978 | ||
Aliases: | None | ||
Description: | NSA2 ribosome biogenesis homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:30728] |
Percent Identity: | 72.18 % |
Parental protein coverage: | 51.56 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MPQNEYIELHRKRYGYRLDYHEKKRKKESREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEK |
M.Q.EY.ELH.KRYG.R.DY.E.KRKKES.EA.ERSKK.....GLKAKL.HK.R......MKK....H.K | |
Retrocopy | MSQHEYTELHPKRYGRRVDYPERKRKKESQEACERSKKPTEVTGLKAKLCHK-RPC*ENTMKKATERHGK |
Parental | RNTKQKNDEKT-PQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEV |
RN.KQK.DEKT.PQGA.PA.LLDREG.SRAKVLSN.IKQKRKEKA.KWEVPLP.VRAQGETEV | |
Retrocopy | RNAKQKSDEKT<PQGAAPACLLDREGRSRAKVLSNTIKQKRKEKARKWEVPLPEVRAQGETEV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |