RetrogeneDB ID: | retro_tbel_3417 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_139755:45742..46156(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NSA2 | ||
Ensembl ID: | ENSTBEG00000012978 | ||
Aliases: | None | ||
Description: | NSA2 ribosome biogenesis homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:30728] |
Percent Identity: | 88.41 % |
Parental protein coverage: | 53.91 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MPQNEYIELHRKRYGYRLDYHEKKRKKESREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEK |
.PQN.YIELH.K.YGY.LDYHEKKRKKESREA.ERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKM.EK | |
Retrocopy | IPQNQYIELHHKHYGYCLDYHEKKRKKESREAPERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMDEK |
Parental | RNTKQKNDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRT |
RNTKQKND.KTPQGA...YLLDREGQS.AKVLSNMIKQ.RKEK.GKWEVPLPKV.AQGETEVLKVI.T | |
Retrocopy | RNTKQKNDVKTPQGAISVYLLDREGQS*AKVLSNMIKQQRKEKVGKWEVPLPKVQAQGETEVLKVIQT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |