RetrogeneDB ID: | retro_tbel_1078 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3778:325404..325815(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NSA2 | ||
Ensembl ID: | ENSTBEG00000012978 | ||
Aliases: | None | ||
Description: | NSA2 ribosome biogenesis homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:30728] |
Percent Identity: | 81.29 % |
Parental protein coverage: | 53.52 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 2 |
Parental | MPQNEYIELHRKRYGYRLDYHEKKRKKESREAHERSKKA-KKMIGLKAKLYHKQRHAE-KIQMKKTIKMH |
.PQNEY.ELH.K.YGYRLDYHEKKRKKE.RE..E.SKKA.KKMIGLKAKLYHKQ.HA..KIQMKKTIK.H | |
Retrocopy | VPQNEYTELHHKCYGYRLDYHEKKRKKERREVLEHSKKA>KKMIGLKAKLYHKQHHAG<KIQMKKTIKLH |
Parental | EKRNTKQKNDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIR |
EKRNTKQKNDEK.P.GA.PAYLLDREGQSR.KVLSNM.KQKRK.K.G...VPLPK..AQGETEVLKVI. | |
Retrocopy | EKRNTKQKNDEKAP*GAAPAYLLDREGQSRVKVLSNMFKQKRK*KVGQS*VPLPKA*AQGETEVLKVIQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |