RetrogeneDB ID: | retro_dord_262 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | GeneScaffold_6818:148612..149050(+) | ||
Located in intron of: | ENSDORG00000006103 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | Ywhab | ||
Ensembl ID: | ENSDORG00000001064 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917] |
Percent Identity: | 58.5 % |
Parental protein coverage: | 81.56 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | IEQK-ERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVAS |
IEQK.E..EKKQQ.G.E....IE..L.DICND.L.LL.K.L.PN......KVFYLK.K.D......EVA. | |
Retrocopy | IEQKTESSEKKQQIG-ENTGRIENKLRDICNDILSLLEKFLTPNSPKAKRKVFYLKIKKDFYHIMAEVAA |
Parental | GDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELD |
G..K...V....QAYQE.F..SKKEMQP.HPIRL.LA..FSVF.YEILNS......L.KTAFDE.IAEL. | |
Retrocopy | GNDKKGIVNQAHQAYQEVF*VSKKEMQPMHPIRLCLAPKFSVFNYEILNSTQEVSFLEKTAFDEIIAELY |
Parental | TLNEESY |
TL.E..Y | |
Retrocopy | TLCELCY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |