RetrogeneDB ID: | retro_tbel_4447 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_83836:4517..4910(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSTBEG00000002806 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 71.43 % |
Parental protein coverage: | 54.07 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | LQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKE |
L.D.CND.L.LL.K.LIP...Q.ESK.FYLK.KG.Y..YL.EVA.GD.K........QA.Q..FE.SKK. | |
Retrocopy | LIDTCNDALSLLEKCLIPHSFQEESKIFYLKVKGNYYCYLAEVADGDKKG--FEDQSQA*QNSFEFSKKD |
Parental | MQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLR |
..P.HPIRLGLALNFSVF.YEILNSPEKACSLAKTAFDEAIAE.DTL.EESYKDSTLI.QLLR | |
Retrocopy | L*PIHPIRLGLALNFSVFCYEILNSPEKACSLAKTAFDEAIAEPDTLSEESYKDSTLILQLLR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |