RetrogeneDB ID: | retro_tbel_1653 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_5387:43799..44202(+) | ||
Located in intron of: | ENSTBEG00000014010 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSTBEG00000002806 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 62.5 % |
Parental protein coverage: | 54.88 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | ATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY |
A.Q..SKVF.LK.KGDY..YL..VA.G..K..T...SQQ..Q..FEIS.KEM.P.H.IRLGL..NF..FY | |
Retrocopy | ASQEKSKVF*LKIKGDYYCYLTKVADGNDKRETEDQSQQP*QDTFEISQKEMRPIHSIRLGLDFNFCLFY |
Parental | YEILNSPEKACSLAKTAF-DEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGEGE |
YEILNS.EKACS..K..F..E.IAELDTL..E.YKDSTLIMQ.LR.NLTLW.....GD...AGE.E | |
Retrocopy | YEILNSTEKACS-CKDSF>EEVIAELDTLSKELYKDSTLIMQFLRHNLTLWRLDTPGDKAVAGERE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |